{
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    "title": "BioCMD",
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    "author": {
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            "id": "https://biocmd.com/biocmd.html",
            "url": "https://biocmd.com/biocmd.html",
            "title": "BioCMD",
            "summary": "Discover the essential CLI tools, scripts, and automation workflows for bioinformatics, genomics, and computational biology. **BioCMD covers:** **Computational Biology** Command-line tools for NGS analysis, genome assembly, variant calling **Bioinformatics Workflows** Nextflow, Snakemake, and production pipelines for biological data **Data Processing** FASTQ processing, BAM/SAM manipulation, VCF…",
            "content_html": "<p>Discover the essential CLI tools, scripts, and automation workflows for bioinformatics, genomics, and computational biology.<br><br>**BioCMD covers:**<br>**Computational Biology** Command-line tools for NGS analysis, genome assembly, variant calling<br>**Bioinformatics Workflows** Nextflow, Snakemake, and production pipelines for biological data<br>**Data Processing** FASTQ processing, BAM/SAM manipulation, VCF analysis, BED/BigWig operations<br>**Visualization** Genome browsers, track hubs, publication-ready plots from the terminal<br>**Automation** Reproducible research pipelines, containerized bio-tools, cluster job submission<br><br>**Featured tools:**<br>samtools • bcftools • bedtools • bowtie2 • HISAT2 • STAR • GATK • <br>Nextflow • Snakemake • MultiQC • FastQC • BBMap • Prokka • QUAST<br><br>**Recent articles:**<br>\"10 Essential Bioinformatics Commands Every Biologist Needs\"<br>\"Build Your First Nextflow Pipeline: From FASTQ to Annotated Genome\"<br>\"Master SAM/BAM Manipulation with samtools (Cheatsheet)\"<br>\"Automate Genome Assembly with Prokka + QUAST\"<br>\"Snakemake vs Nextflow: Which Workflow Manager for Bioinformatics?\"<br><br>Join 2,300+ computational biologists using BioCMD for faster analysis and reproducible research.<br><br>[Read more]</p>",
            "author": {
                "name": "BioCMD Editorial"
            },
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            ],
            "date_published": "2026-04-10T18:23:32+02:00",
            "date_modified": "2026-04-10T18:23:32+02:00"
        }
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